BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025G10SP1|AL428445
(877 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1802 1664 0.0
>3x_Contig1802
Length = 45229
Score = 1664 bits (831), Expect = 0.0
Identities = 859/877 (97%)
Strand = Plus / Plus
Query: 1 gatctctattaatctagattcgtccggcctgataatagataaaaggaatcactatcaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4335 gatctctattaatctagattcgtccggcctgataatagataaaaggaatcactatcaaac 4394
Query: 61 aggtttcctgtttgtaccggctatctgtatcttcaaaactattcaatttttccagttcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4395 aggtttcctgtttgtaccggctatctgtatcttcaaaactattcaatttttccagttcgt 4454
Query: 121 gttaccagcaattagtgatcaaaaatccggattcatgaaacgaatccgaaccttgcagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4455 gttaccagcaattagtgatcaaaaatccggattcatgaaacgaatccgaaccttgcagtt 4514
Query: 181 tgggcgtgaaactatgtkacgcatacaaacagtcaagaattcaaatgakaaatkataaac 240
||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 4515 tgggcgtgaaactatgttacgcatacaaacagtcaagaattcaaatgataaattataaac 4574
Query: 241 aaattcaaaaccttactttgagacacttataaactttttttatatgakacataactatgc 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4575 aaattcaaaaccttactttgagacacttataaactttttttatatgatacataactatgc 4634
Query: 301 gcataaatttgtctggctctctacaaccaatggcacttattttctataatagaggkrgga 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 4635 tcataaatttgtctggctctctacaaccaatggcacttattttctataatagatgtagga 4694
Query: 361 tatatctatcgctttctacctttatagcgaagaaatctacacattcattgtkgtcaccgt 420
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 4695 tatatctatcgctttctacctttatagctaagaaatctacacattcattgttgtcaccgt 4754
Query: 421 cgccgacgckgtcgkttgtcaggraaagtcatgtgatcacaaaatcactactgaractgt 480
||||||||| |||| |||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 4755 cgccgacgctgtcgtttgtcaggaaaagtcatgtgatcacaaaatcactactgaaactgt 4814
Query: 481 agagcattccgaaaagatcaggaagagtgcttgtgccataacacccgggcccctcaatct 540
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4815 agagcattccgaaaagatcaggaagagtgcttgtgccataacacccgtgcccctcaatct 4874
Query: 541 atgcgttcagcgctgtggctaaagaaaaagaaatattattacccggactgtkaaagtgtc 600
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4875 atgctttcagcgctgtggctaaagaaaaagaaatattattacccggactgttaaagtgtc 4934
Query: 601 ggaagatgccttcgagatgaatttcttttggtctatgcgaaaaaaagaaatgatttagtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4935 ggaagatgccttcgagatgaatttcttttggtctatgcgaaaaaaagaaatgatttagtt 4994
Query: 661 catgcgatgagcaattggtgattgagagaggaatacacactagcaacttaattttgactc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4995 catgcgatgagcaattggtgattgagagaggaatacacactagcaacttaattttgactc 5054
Query: 721 ttcagatcagtcgatggtaaacctcgggatttcagttgtgttatgccacttctaatgtac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5055 ttcagatcagtcgatggtaaacctcgggatttcagttgtgttatgccacttctaatgtac 5114
Query: 781 caaaaatttcctgtttggtttcttcagtaagcaagatttggcatatatatatatatccat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5115 caaaaatttcctgtttggtttcttcagtaagcaagatttggcatatatatatatatccat 5174
Query: 841 ttatatataatttacttcggttatgtacatggratgc 877
|||||||||||||||||||||||||||||||| ||||
Sbjct: 5175 ttatatataatttacttcggttatgtacatggaatgc 5211
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,428
Number of Sequences: 1807
Number of extensions: 10428
Number of successful extensions: 288
Number of sequences better than 1.0e-20: 1
length of query: 877
length of database: 10,358,551
effective HSP length: 16
effective length of query: 861
effective length of database: 10,329,639
effective search space: 8893819179
effective search space used: 8893819179
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)